SNP Profiles matching ICS 48

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CC	AA
1._GC-05-077-2-28	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CC	AA
2._GC-05-077-2-28	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CC	AA
3._GC-05-077-2-28	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CC	AA
4._GC-05-077-2-28	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CC	AA
5._GC-05-077-2-28	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CC	AA
6._GC-05-078-2-29	TT	AA	GG	CT	TT	AA	CC	TT	CC	TT	AA	AA	CC	AA
7._RUQ_936	_	AA	GG	CT	_	_	_	TT	_	_	_	_	CC	AA
8._RUQ_544	_	AA	GG	CT	_	_	_	TT	_	_	_	_	CC	AA

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	TT	AA	GG	TT	CC	GG	GT	GG	TT	CC	CG	TT	TT	CC
1._GC-05-077-2-28	TT	AA	GG	TT	CC	GG	GT	GG	TT	CC	CG	TT	TT	CC
2._GC-05-077-2-28	TT	AA	GG	TT	CC	GG	GT	GG	TT	CC	CG	TT	TT	CC
3._GC-05-077-2-28	TT	AA	GG	TT	CC	GG	GT	GG	TT	CC	CG	TT	TT	CC
4._GC-05-077-2-28	TT	AA	GG	TT	CC	GG	GT	GG	TT	CC	CG	TT	TT	CC
5._GC-05-077-2-28	TT	AA	GG	TT	CC	GG	GT	GG	TT	CC	CG	TT	TT	CC
6._GC-05-078-2-29	TT	AA	GG	TT	CC	GG	GT	GG	TT	CC	CG	TT	TT	CC
7._RUQ_936	_	_	_	_	CC	GG	GT	_	TT	CC	CG	TT	-	CC
8._RUQ_544	_	_	_	_	CC	GG	GT	_	TT	CC	CG	TT	-	CC

	29	30	31	32	33	34	35	36	37	38	39	40
_Input profile	AA	GG	AA	CT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X
1._GC-05-077-2-28	AA	GG	AA	CT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X
2._GC-05-077-2-28	AA	GG	AA	CT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X
3._GC-05-077-2-28	AA	GG	AA	CT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X
4._GC-05-077-2-28	AA	GG	AA	CT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X
5._GC-05-077-2-28	AA	GG	AA	CT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X
6._GC-05-078-2-29	AA	GG	AA	CT	AG	CC	AA	CC	TT	CC	TT	GG	X_X	X_X
7._RUQ_936	AA	_	AA	CT	AG	CC	AA	CC	TT	CC	_	_	X_X	X_X
8._RUQ_544	AA	_	AA	CT	AG	CC	AA	CC	TT	CC	_	_	X_X	X_X

Input profile: ICS_48

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Mars Center for Cocoa Science, Brazil

Location: 5229 2 > FP

Dapeng Zhang, 2016

1._CERRO_AZUL_10 GC-05-077-2-28

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1 > FP1

Mars, 2018

2._CERRO_AZUL_10 GC-05-077-2-28

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

Mars, 2018

3._CERRO_AZUL_10 GC-05-077-2-28

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3 > FP3

Mars, 2018

4._CERRO_AZUL_10 GC-05-077-2-28

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4 > FP4

Mars, 2018

5._CERRO_AZUL_10 GC-05-077-2-28

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

Mars, 2018

6._ICS_48 GC-05-078-2-29

identical
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

Mars, 2018

7._CERRO_AZUL_10 RUQ_936

identical
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

8._DOM_4 RUQ_544

identical
23 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

Key to SNP Markers

1	TcSNP1520	2	TcSNP1484	3	TcSNP1458	4	TcSNP1442	5	TcSNP1414
6	TcSNP1350	7	TcSNP1270	8	TcSNP1253	9	TcSNP1165	10	TcSNP1144
11	TcSNP1075	12	TcSNP1062	13	TcSNP1060	14	TcSNP998	15	TcSNP994
16	TcSNP953	17	TcSNP929	18	TcSNP917	19	TcSNP891	20	TcSNP872
21	TcSNP723	22	TcSNP645	23	TcSNP619	24	TcSNP591	25	TcSNP577
26	TcSNP560	27	TcSNP534	28	TcSNP529	29	TcSNP469	30	TcSNP429
31	TcSNP372	32	TcSNP242	33	TcSNP230	34	TcSNP226	35	TcSNP193
36	TcSNP151	37	TcSNP150	38	TcSNP144	39	TcSNP32	40	TcSNP25

SNP Profiles matching ICS 48

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Input profile: ICS_48

1._CERRO_AZUL_10 GC-05-077-2-28

identical 40 shared markers

2._CERRO_AZUL_10 GC-05-077-2-28

identical 40 shared markers

3._CERRO_AZUL_10 GC-05-077-2-28

identical 40 shared markers

4._CERRO_AZUL_10 GC-05-077-2-28

identical 40 shared markers

5._CERRO_AZUL_10 GC-05-077-2-28

identical 40 shared markers

6._ICS_48 GC-05-078-2-29

identical 40 shared markers

7._CERRO_AZUL_10 RUQ_936

identical 23 shared markers

8._DOM_4 RUQ_544

identical 23 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
40 shared markers

identical
23 shared markers

identical
23 shared markers